my 2009 manual has the regular maintenance information at the back, with the parts that apply to specific transmissions or engines listed with something like "(tdi only)" at the end of said lines.
So, for instance, when you look at the 10k maintenance, you should see a list of things including the oil change, tire rotation, etc. Anything that doesn't specifically mention an engine at the end of the line applies to all of the cars... and anything that mentions just the gas, diesel, automatic, and manual cars relate to only those cars.
The 2009 2.0 CR TDI engines have a 10k oil change interval (and could really go to about 15k without any worries). Most other regular maintenance items like the fuel filter, cabin filter, etc. are replaced on 20k intervals.
I'm pretty sure the fuel filter should be done at 20k and 40k.. the air filter is to be done at 60k for sure (can't remember if it was replaced previously.. don't have the manual in front of me).
If you don't have this information available, I'd be happy to list it out for you.