I just thought of 1 leak I had that a leak test wouldn't have turned up...the mk3 cars have a vacuum tube inside the ecu that always splits and shows up as a "bad ecu". The tube is part of the line that goes from the pressure sensor inside the ecu to the intake tubing.
You won't be able to hear it because the leak is inside the ecu. The split is so small and the sound is masked because it's inside a metal box...that would be a PITA to find if you didn't know about it.