The EGR is disabled with a plug in the vacuum line until I get around to purchasing a VCDS cable and set the EGR duty cycle down as low as I can. I'll then hook the vacuum hose back up since it won't be doing anything.
At the moment it throws a check-engine light every so often P0401 if I remember correctly and I just clear it with my scangauge.
The CCV is another beast entirely, there are threads on this forum describing ways of de-oiling and de-watering the CCV output and then re-introducing it back into the intake pre-turbo.
For now I got a small filter from autozone that looks similar to the following:
http://www.amazon.com/Spectre-3996-Chrome-Cotton-Breather/dp/B00062ZI86/ref=pd_sbs_auto_1
I drilled out the rubber to increase the diameter of the input and it fits very tightly into the rubber grommet that the CCV puck fits into. I took off the puck and put that in my spare parts box and used a stopper around the right size and blocked the input tube that would have connected to the other port on the puck.
The gauze was blue when I started, now it is dark blue so the oil is having some effect on it. It hasn't started weeping or making a mess so perhaps the oil that solidifies inside it drips back down into the cam cover.
It remains to be seen how it behaves in the winter but I don't think I will have any issues with freezing moisture.